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Lyophilized Peptide and Protein Stability: What Storage Studies Report
Last reviewed: September 16, 2026
Lyophilization (freeze-drying) is described in the formulation literature as a solidification strategy used because therapeutic peptides and proteins frequently show chemical degradation during handling in liquid dosage forms, with solid formulations investigated as a way to limit physical and chemical change during storage and transport [2]. Laboratory protocols for pure proteins describe lyophilization as a multi-stage process comprising freezing, primary drying, and secondary drying, and identify the glass transition temperature of the dried cake as a key design parameter measured by modulated differential scanning calorimetry [1]. The same methodological literature discusses stabilizing additives and the prevention of proteolytic degradation and microbial contamination as separate variables from the drying process itself [1].
Several solid-state studies have examined how the glassy matrix relates to measured degradation rates. In freeze-dried recombinant human interleukin-1 receptor antagonist, ten formulations with glass transition temperatures spanning roughly 20 to 56 °C were stored above and below their respective glass transition temperatures; in vitro analysis found deamidation and aggregation were greatly accelerated above the glass transition temperature but also occurred below it in some formulations, leading the authors to conclude that sub-glass-transition storage was necessary but not sufficient for long-term stability [3]. In the same in vitro work, formulations prepared with 1% or less sucrose showed an unfolded protein conformation in the initial dried solid, while formulations with 5% or more sucrose inhibited conformational change during lyophilization, and degradation at 50 °C varied inversely with sucrose concentration [3]. A separate in vitro study of lyophilized keratinocyte growth factor-2 formulated with sucrose or trehalose and hydroxyethyl starch measured degradation at 40, 50, and 60 °C and reported that degradation rates were highest where native secondary structure was most perturbed and where fast beta relaxations were fastest, but that the dominant correlate of degradation was the fraction of protein estimated to reside at the glass solid-air interface [4].
Residual moisture has been studied as a distinct variable. In vitro work on lyophilized insulin exposed to elevated temperature and moisture reported both covalent and non-covalent aggregation, with the covalent route characterised as intermolecular thiol-catalysed disulfide interchange following beta-elimination of a disulfide bridge; the extent of aggregation correlated directly with water uptake by the lyophilized powder [5]. Chemical degradation pathways can also differ between phases: an in vitro study of a model peptide (EVQLVESGGGLVQPGGSLR) formulated across apparent 'pH' 4 to 9 and stored at 50 °C found that the apparent 'pH' dependence of N-terminal pyroglutamate formation in lyophilized solids differed markedly from that in solution, and that in the apparent 'pH' 5.5–6 range the solid-state reaction rate exceeded the solution rate [6].
Excipient identity has repeatedly emerged as a measured determinant in solid-state stability screens. An in vitro study of a lyophilized monoclonal antibody reported that sucrose remained the primary stabilizing agent, that partially amorphous glycine was associated with a significant increase in stability, and that mannitol showed little stabilizing ability in that system despite producing crystalline cakes [7]. In a spin-freeze-drying study of a PEGylated peptide, variations in cooling and crystallization rates produced no consistent statistically significant effect on peptide or monomer content, whereas formulation composition dominated: trehalose-based samples remained stable at 2–8 °C and under 50 °C stress, mannitol-based samples showed moderate degradation at elevated temperature, and a 75:25 sucrose–mannitol system showed cake collapse, browning, and interference in peptide quantification attributed to sucrose hydrolysis [8]. Solid-state hydrogen-deuterium exchange mass spectrometry of four lyophilized granulocyte colony stimulating factor formulations correlated deuterium uptake with monomer content remaining after lyophilization and storage at −20 °C, ranking sucrose above phenylalanine, mannitol, and no excipient, while storage at 45 °C produced little difference between formulations [9].
Long-duration storage studies report time- and temperature-dependent outcomes for specific molecules. Lyophilized NOTA-single-domain antibody fragment precursors formulated with a mannitol–sucrose mix and polysorbate 80 showed in vitro integrity, absence of aggregation, and retained labeling efficiency for up to 12–18 months at 2–8 °C, and biodistribution in wild-type and tumour-bearing mice was comparable to non-lyophilized precursor [10]. A freeze-dried mucoadhesive matrix containing the antimicrobial peptide hLF 1-11 showed no detectable chemical degradation for at least 6 months in long-term stability testing, with antimicrobial activity in vitro reported at up to 15 months of storage [11]. Characterisation of yolkin, a hen egg yolk polypeptide complex, reported stability in lyophilized form with storage at 4 °C described as preferable in that in vitro assessment [12]. In an animal study, freeze-dried platelet-rich plasma and adipose stem cell-conditioned medium retained platelet-derived and vascular endothelial growth factor levels comparable to fresh material after freeze-drying and 90 days of storage, with a significant reduction measured at 180 days [14]. Review literature on erythropoietin similarly frames temperature fluctuation, light exposure, and interactions with other substances as instability factors, and lists excipients, lyophilization, and optimized storage conditions among the stabilization strategies studied [13].
Analyte stability during dried storage has also been measured outside peptide drug formulation. In human blood samples spotted on filter paper, thyroid-stimulating hormone measurements remained stable to day 30 when stored at 22 °C and to day 60 under refrigerated or freezer storage, with samples held at 22 °C showing a greater decrease than refrigerated or frozen samples over one year [15]. Taken together, the cited work treats glass transition temperature, retained secondary structure, specific surface area and solid-air interface fraction, residual moisture, excipient selection, apparent 'pH', and storage temperature as measurable, interacting variables in solid-state degradation, and the results are formulation- and molecule-specific rather than generalizable across peptides [2][3][4][8].
In plain terms
Freeze-drying is used in formulation research because peptides and proteins often change chemically when kept as liquids, and laboratory work describes the dried cake's glass transition temperature as a central design number [2][1]. In cell-free laboratory studies, a freeze-dried protein degraded much faster when stored above its glass transition temperature, but some degradation still happened below it, so staying below that temperature was described as necessary but not enough [3]. Other laboratory studies found that how much protein sits at the surface of the dried glass, how much the protein's folded structure was disturbed during drying, and how much water the powder picks up all tracked with how quickly the material broke down or clumped together [4][5].
Which sugars and fillers are in the mix mattered a lot in these laboratory tests. Sucrose was the main protective ingredient for a dried antibody and partly amorphous glycine helped, while mannitol did little [7]. For a PEGylated peptide, changing the freezing settings made no consistent difference, but the recipe did: a trehalose version held up at refrigerated and 50 °C conditions, mannitol showed moderate breakdown when hot, and a sucrose–mannitol blend collapsed and browned at 50 °C [8]. A mass-spectrometry method on a dried protein ranked sucrose ahead of phenylalanine, mannitol, and no excipient for material stored at −20 °C, with those differences disappearing at 45 °C [9]. Chemical routes can also behave differently in the dry state than in liquid: in one model peptide, a specific end-group reaction ran faster in the solid than in solution in a commonly used apparent 'pH' range [6].
Longer storage studies looked at specific molecules. A freeze-dried antibody fragment held together in the lab for 12 to 18 months at 2–8 °C, and in mice it distributed much like the non-freeze-dried version [10]. A freeze-dried peptide-loaded matrix showed no measurable chemical breakdown for at least 6 months, with activity against microbes still seen in cell-free testing at 15 months [11], and a polypeptide complex from egg yolk was reported as stable when freeze-dried and kept at 4 °C in laboratory testing [12]. In horses, freeze-dried platelet-rich plasma and conditioned medium kept their growth-factor levels through 90 days but dropped significantly by 180 days [14]. In dried human blood spots, a hormone measurement stayed level to 30 days at room temperature and to 60 days when refrigerated or frozen, with room-temperature samples falling further over a year [15]. Review articles on erythropoietin describe temperature swings, light, and other ingredients as instability factors studied in this field [13]. Overall, the cited findings are tied to the particular molecule and recipe tested rather than applying to peptides in general [2][3][4][8].
References
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- Angkawinitwong U, Sharma G, Khaw PT, Brocchini S, Williams GR. Solid-state protein formulations.. Ther Deliv. 2015. (in vitro) PubMed
- Chang BS, Beauvais RM, Dong A, Carpenter JF. Physical factors affecting the storage stability of freeze-dried interleukin-1 receptor antagonist: glass transition and protein conformation.. Arch Biochem Biophys. 1996. (in vitro) PubMed
- Devineni D, Gonschorek C, Cicerone MT, Xu Y, Carpenter JF, Randolph TW. Storage stability of keratinocyte growth factor-2 in lyophilized formulations: effects of formulation physical properties and protein fraction at the solid-air interface.. Eur J Pharm Biopharm. 2014. (in vitro) PubMed
- Costantino HR, Langer R, Klibanov AM. Moisture-induced aggregation of lyophilized insulin.. Pharm Res. 1994. (in vitro) PubMed
- Bersin LM, Patel SM, Topp EM. Effect of 'pH' on the Rate of Pyroglutamate Formation in Solution and Lyophilized Solids.. Mol Pharm. 2021. (in vitro) PubMed
- Meyer JD, Nayar R, Manning MC. Impact of bulking agents on the stability of a lyophilized monoclonal antibody.. Eur J Pharm Sci. 2009. (in vitro) PubMed
- Schaal Z, Bockstal PV, Lammens J, Lenger JH, Funke AP, Schneid SC, Beer T. Impact of spin-freezing parameters and excipient composition on product stability of a PEGylated peptide formulation.. Int J Pharm. 2025. (in vitro) PubMed
- Wood VE, Kellerman MA, Groves K, Quaglia M, Topp EM, Matejtschuk P, Dalby PA. Investigation of the Solid-State Interactions in Lyophilized Human G-CSF Using Hydrogen-Deuterium Exchange Mass Spectrometry.. Mol Pharm. 2024. (in vitro) PubMed
- Baudhuin H, Van Bockstal PJ, De Beer T, Vaneycken I, Bridoux J, Raes G, Caveliers V, Keyaerts M, Devoogdt N, Lahoutte T, Xavier C. Lyophilization of NOTA-sdAbs: First step towards a cold diagnostic kit for 68Ga-labeling.. Eur J Pharm Biopharm. 2021. (animal) PubMed
- Terreni E, Burgalassi S, Chetoni P, Tampucci S, Zucchetti E, Fais R, Ghelardi E, Lupetti A, Monti D. Development and Characterization of a Novel Peptide-Loaded Antimicrobial Ocular Insert.. Biomolecules. 2020. (in vitro) PubMed
- Zambrowicz A, Kapczyńska K, Kania P, Nowak JS, Kaszowska M, Szymczak-Kulus K, Kazana-Płuszka W, Piksa M, Górska S, Jakubczyk D, Macała J, Zabłocka A. Unravelling the potential of yolkin for nutraceutical use: the origin, structure, and functional insights of a hen egg yolk polypeptide complex.. Food Funct. 2024. (in vitro) PubMed
- Fayed B, Luo S, Yassin AEB. Challenges and recent advances in erythropoietin stability.. Pharm Dev Technol. 2024. (in vitro) PubMed
- Freitas NPP, Silva BDP, Bezerra MRL, Pescini LYG, Olinda RG, Salgueiro CCM, Nunes JF, Martins JAM, Neto SG, Martins LT. Freeze-dried Platelet-rich Plasma and Stem Cell-conditioned Medium for Therapeutic Use in Horses.. J Equine Vet Sci. 2023. (animal) PubMed
- Magalhães PKR, Miranda CH, Vilar FC, Schmidt A, Bittar RR, Paixão GACC, Martinez EZ, Maciel LMZ. Effects of drying and storage conditions on the stability of TSH in blood spots.. Arch Endocrinol Metab. 2018. (human) PubMed
